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1 Wuppuluri, Shyam From Electrons to Elephants and Elections I12534 2022 Book  
2 Milstein, Grigori N Stochastic Numerics for Mathematical Physics I11924 2021 eBook  
3 Kulasiri, Don Chemical Master Equation for Large Biological Networks I11686 2021 eBook  
4 Cleri, Fabrizio The Physics of Living Systems I10102 2016 eBook  
5 Aranson, Igor S Physical Models of Cell Motility I10050 2016 eBook  
6 Archilla, Juan F. R Nonlinear Systems, Vol. 2 I10005 2018 eBook  
7 Schuster, Peter Stochasticity in Processes I09861 2016 eBook  
8 Scherer, Philipp O.J Theoretical Molecular Biophysics I09798 2017 eBook  
9 Smirnova, Olga A Environmental Radiation Effects on Mammals I09761 2017 eBook  
10 Thiriet, Marc Vasculopathies I09702 2018 eBook  
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TitleFrom Electrons to Elephants and Elections : Exploring the Role of Content and Context
Author(s)Wuppuluri, Shyam;Stewart, Ian
PublicationCham, 1. Imprint: Springer 2. Springer International Publishing, 2022.
DescriptionXXX, 876 p. 54 illus., 28 illus. in color : online resource
Abstract NoteThis highly interdisciplinary book, covering more than six fields, from philosophy and sciences all the way up to the humanities and with contributions from eminent authors, addresses the interplay between content and context, reductionism and holism and their meeting point: the notion of emergence. Much of today???s science is reductionist (bottom-up); in other words, behaviour on one level is explained by reducing it to components on a lower level. Chemistry is reduced to atoms, ecosystems are explained in terms of DNA and proteins, etc. This approach fails quickly since we can???t cannot extrapolate to the properties of atoms solely from Schr??dinger's equation, nor figure out protein folding from an amino acid sequence or obtain the phenotype of an organism from its genotype. An alternative approach to this is holism (top-down). Consider an ecosystem or an organism as a whole: seek patterns on the same scale. Model a galaxy not as 400 billion-point masses (stars) but as an object in its own right with its own properties (spiral, elliptic). Or a hurricane as a structured form of moist air and water vapour. Reductionism is largely about content, whereas holistic models are more attuned to context. Reductionism (content) and holism (context) are not opposing philosophies ??? in fact, they work best in tandem. Join us on a journey to understand the multifaceted dialectic concerning this duo and how they shape the foundations of sciences and humanities, our thoughts and, the very nature of reality itself
ISBN,Price9783030921927
Keyword(s)1. BIOMATHEMATICS 2. COMPLEX SYSTEMS 3. Eastern Philosophy 4. EBOOK 5. EBOOK - SPRINGER 6. EPISTEMOLOGY 7. Knowledge, Theory of 8. Mathematical and Computational Biology 9. NEUROSCIENCE 10. Neurosciences 11. Philosophy, Asian 12. STATISTICAL MECHANICS 13. SYSTEM THEORY
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TitleStochastic Numerics for Mathematical Physics
Author(s)Milstein, Grigori N;Tretyakov, Michael V
PublicationCham, Springer International Publishing, 2021.
DescriptionXXV, 736 p. 33 illus : online resource
Abstract NoteThis book is a substantially revised and expanded edition reflecting major developments in stochastic numerics since the first edition was published in 2004. The new topics, in particular, include mean-square and weak approximations in the case of nonglobally Lipschitz coefficients of Stochastic Differential Equations (SDEs) including the concept of rejecting trajectories; conditional probabilistic representations and their application to practical variance reduction using regression methods; multi-level Monte Carlo method; computing ergodic limits and additional classes of geometric integrators used in molecular dynamics; numerical methods for FBSDEs; approximation of parabolic SPDEs and nonlinear filtering problem based on the method of characteristics. SDEs have many applications in the natural sciences and in finance. Besides, the employment of probabilistic representations together with the Monte Carlo technique allows us to reduce the solution of multi-dimensional problems for partial differential equations to the integration of stochastic equations. This approach leads to powerful computational mathematics that is presented in the treatise. Many special schemes for SDEs are presented. In the second part of the book numerical methods for solving complicated problems for partial differential equations occurring in practical applications, both linear and nonlinear, are constructed. All the methods are presented with proofs and hence founded on rigorous reasoning, thus giving the book textbook potential. An overwhelming majority of the methods are accompanied by the corresponding numerical algorithms which are ready for implementation in practice. The book addresses researchers and graduate students in numerical analysis, applied probability, physics, chemistry, and engineering as well as mathematical biology and financial mathematics
ISBN,Price9783030820404
Keyword(s)1. BIOMATHEMATICS 2. Chemometrics 3. Computational Science and Engineering 4. EBOOK 5. EBOOK - SPRINGER 6. ENGINEERING MATHEMATICS 7. Engineering???Data processing 8. Mathematical and Computational Biology 9. Mathematical and Computational Engineering Applications 10. Mathematical Applications in Chemistry 11. MATHEMATICAL PHYSICS 12. Mathematics in Business, Economics and Finance 13. Mathematics???Data processing 14. Social sciences???Mathematics 15. Theoretical, Mathematical and Computational Physics
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TitleChemical Master Equation for Large Biological Networks : State-space Expansion Methods Using AI
Author(s)Kulasiri, Don;Kosarwal, Rahul
PublicationSingapore, Springer Nature Singapore, 2021.
DescriptionXVIII, 217 p. 372 illus., 104 illus. in color : online resource
Abstract NoteThis book highlights the theory and practical applications of the chemical master equation (CME) approach for very large biochemical networks, which provides a powerful general framework for model building in a variety of biological networks. The aim of the book is to not only highlight advanced numerical solution methods for the CME, but also reveal their potential by means of practical examples. The case studies presented are mainly from biology; however, the applications from novel methods are discussed comprehensively, underlining the interdisciplinary approach in simulation and the potential of the chemical master equation approach for modelling bionetworks. The book is a valuable guide for researchers, graduate students, and professionals alike
ISBN,Price9789811653513
Keyword(s)1. ARTIFICIAL INTELLIGENCE 2. BIOINFORMATICS 3. BIOMATHEMATICS 4. Computational and Systems Biology 5. Computational Intelligence 6. Computational Physics and Simulations 7. COMPUTER SIMULATION 8. EBOOK 9. EBOOK - SPRINGER 10. Mathematical and Computational Biology 11. MATHEMATICAL PHYSICS
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TitleThe Physics of Living Systems
Author(s)Cleri, Fabrizio
PublicationCham, Springer International Publishing, 2016.
DescriptionXXIV, 620 p. 204 illus., 173 illus. in color : online resource
Abstract NoteIn this book, physics in its many aspects (thermodynamics, mechanics, electricity, fluid dynamics) is the guiding light on a fascinating journey through biological systems, providing ideas, examples and stimulating reflections for undergraduate physics, chemistry and life-science students, as well as for anyone interested in the frontiers between physics and biology. Rather than introducing a lot of new information, it encourages young students to use their recently acquired knowledge to start seeing the physics behind the biology. As an undergraduate textbook in introductory biophysics, it includes the necessary background and tools, including exercises and appendices, to form a progressive course. In this case, the chapters can be used in the order proposed, possibly split between two semesters. The book is also an absorbing read for researchers in the life sciences who wish to refresh or go deeper into the physics concepts gleaned in their early years of scientific training. Less physics-oriented readers might want to skip the first chapter, as well as all the "gray boxes" containing the more formal developments, and create their own ??-la-carte menu of chapters
ISBN,Price9783319306476
Keyword(s)1. Animal Physiology 2. Biological and Medical Physics, Biophysics 3. BIOLOGICAL PHYSICS 4. BIOMATHEMATICS 5. Biomedical engineering 6. Biomedical Engineering and Bioengineering 7. Bioorganic Chemistry 8. BIOPHYSICS 9. EBOOK 10. EBOOK - SPRINGER 11. Human physiology 12. Mathematical and Computational Biology
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TitlePhysical Models of Cell Motility
Author(s)Aranson, Igor S
PublicationCham, Springer International Publishing, 2016.
DescriptionIX, 201 p. 61 illus., 9 illus. in color : online resource
Abstract NoteThis book surveys the most recent advances in physics-inspired cell movement models. This synergetic, cross-disciplinary effort to increase the fidelity of computational algorithms will lead to a better understanding of the complex biomechanics of cell movement, and stimulate progress in research on related active matter systems, from suspensions of bacteria and synthetic swimmers to cell tissues and cytoskeleton.Cell motility and collective motion are among the most important themes in biology and statistical physics of out-of-equilibrium systems, and crucial for morphogenesis, wound healing, and immune response in eukaryotic organisms. It is also relevant for the development of effective treatment strategies for diseases such as cancer, and for the design of bioactive surfaces for cell sorting and manipulation. Substrate-based cell motility is, however, a very complex process as regulatory pathways and physical force generation mechanisms are intertwined. To understand the interplay between adhesion, force generation and motility, an abundance of computational models have been proposed in recent years, from finite element to??immerse interface methods and phase field approaches.??This book is primarily written for physicists, mathematical biologists and biomedical engineers working in this rapidly expanding field, and can serve as supplementary reading for advanced graduate courses in biophysics and mathematical biology. The e-book incorporates experimental and computer animations illustrating various aspects of cell movement
ISBN,Price9783319244488
Keyword(s)1. Bioinformatics?? 2. Biological and Medical Physics, Biophysics 3. BIOLOGICAL PHYSICS 4. BIOMATHEMATICS 5. Biomedical engineering 6. Biomedical Engineering and Bioengineering 7. BIOPHYSICS 8. Computational biology?? 9. Computer Appl. in Life Sciences 10. EBOOK 11. EBOOK - SPRINGER 12. Numerical and Computational Physics, Simulation 13. PHYSICS 14. Physiological, Cellular and Medical Topics
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TitleNonlinear Systems, Vol. 2 : Nonlinear Phenomena in Biology, Optics and Condensed Matter
Author(s)Archilla, Juan F. R;Palmero, Faustino;Lemos, M. Carmen;S??nchez-Rey, Bernardo;Casado-Pascual, Jes??s
PublicationCham, Springer International Publishing, 2018.
DescriptionXIX, 340 p. 144 illus., 95 illus. in color : online resource
Abstract NoteThis book presents an overview of the most recent advances in nonlinear science. It provides a unified view of nonlinear properties in many different systems and highlights many?? new developments. While volume 1 concentrates on mathematical theory and computational techniques and challenges, which are essential for the study of nonlinear science, this second volume deals with nonlinear excitations in several fields. These excitations can be localized and transport energy and matter in the form of breathers, solitons, kinks or quodons with very different characteristics, which are discussed in the book. They can also transport electric charge, in which case they are known as polarobreathers or solectrons. Nonlinear excitations can influence function and structure in biology, as for example, protein folding. In crystals and other condensed matter, they can modify transport properties, reaction kinetics and interact with defects. There are also engineering applications in electric lattices, Josephson junction arrays, waveguide arrays, photonic crystals and optical fibers. Nonlinear excitations are inherent to Bose-Einstein Condensates, constituting an excellent benchmark for testing their properties and providing a pathway for future discoveries in fundamental physics.??
ISBN,Price9783319722184
Keyword(s)1. Applications of Nonlinear Dynamics and Chaos Theory 2. BIOINFORMATICS 3. BIOMATHEMATICS 4. Computational Biology/Bioinformatics 5. CONDENSED MATTER 6. CONDENSED MATTER PHYSICS 7. EBOOK 8. EBOOK - SPRINGER 9. Mathematical and Computational Biology 10. MICROWAVES 11. Microwaves, RF and Optical Engineering 12. OPTICAL ENGINEERING 13. STATISTICAL PHYSICS
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TitleStochasticity in Processes : Fundamentals and Applications to Chemistry and Biology
Author(s)Schuster, Peter
PublicationCham, Springer International Publishing, 2016.
DescriptionXVI, 718 p. 168 illus., 162 illus. in color : online resource
Abstract NoteThis book has developed over the past fifteen years from a modern course on stochastic chemical kinetics for graduate students in physics, chemistry and biology. The first part presents a systematic collection of the mathematical background material needed to understand probability, statistics, and stochastic processes as a prerequisite for the increasingly challenging practical applications in chemistry and the life sciences examined in the second part. Recent advances in the development of new techniques and in the resolution of conventional experiments at nano-scales have been tremendous: today molecular spectroscopy can provide insights into processes down to scales at which current theories at the interface of physics, chemistry and the life sciences cannot be successful without a firm grasp of randomness and its sources. Routinely measured data is now sufficiently accurate to allow the direct recording of fluctuations. As a result, the sampling of data and the modeling of relevant processes are doomed to produce artifacts in interpretation unless the observer has a solid background in the mathematics of limited reproducibility. The material covered is presented in a modular approach, allowing more advanced sections to be skipped if the reader is primarily interested in applications. At the same time, most derivations of analytical solutions for the selected examples are provided in full length to guide more advanced readers in their attempts to derive solutions on their own. The book employs uniform notation throughout, and a glossary has been added to define the most important notions discussed
ISBN,Price9783319395029
Keyword(s)1. Biological and Medical Physics, Biophysics 2. BIOLOGICAL PHYSICS 3. BIOMATHEMATICS 4. BIOPHYSICS 5. BIOSTATISTICS 6. Chemistry, Physical and theoretical 7. COMPLEX SYSTEMS 8. DYNAMICAL SYSTEMS 9. EBOOK 10. EBOOK - SPRINGER 11. Mathematical and Computational Biology 12. STATISTICAL PHYSICS 13. Systems biology 14. Theoretical and Computational Chemistry
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TitleTheoretical Molecular Biophysics
Author(s)Scherer, Philipp O.J;Fischer, Sighart F
PublicationBerlin, Heidelberg, Springer Berlin Heidelberg, 2017.
DescriptionXVI, 513 p. 226 illus., 27 illus. in color : online resource
Abstract NoteThis book gives an introduction to molecular biophysics. It starts from material properties at equilibrium related to polymers, dielectrics and membranes. Electronic spectra are developed for the understanding of elementary dynamic processes in photosynthesis including proton transfer and dynamics of molecular motors. Since the molecular structures of functional groups of bio-systems were resolved, it has become feasible to develop a theory based on the quantum theory and statistical physics with emphasis on the specifics of the high complexity of bio-systems. This introduction to molecular aspects of the field focuses on solvable models. Elementary biological processes provide as special challenge the presence of partial disorder in the structure which does not destroy the basic reproducibility of the processes. Apparently the elementary molecular processes are organized in a way to optimize the efficiency. Learning from nature by means exploring the relation between structure and function may even help to build better artificial solar cells. The reader is exposed to basic concepts in modern biophysics, such as entropic forces, phase separation, potential of mean force, electron and proton transfer, heterogeneous reactions, coherent and incoherent energy transfer as well as molecular motors. Basic knowledge in classical and Quantum mechanics, electrostatics and statistical physics is desirable. Simplified models are presented which can be solved in limited cases analytically from the guiding lines to generate the basis for a fundamental understanding of the more complex biophysical systems. Chapters close with challenging problems whose solutions are provided at the end of the book to complete the pedagogical treatment in the book. To the second edition several new chapters were added. The medium polarization is treated self-consistently using basic elements of polaron theory and more advanced nonlinear Schr??dinger equations to describe the dynamics of solvation. Ion transport through a membrane was extended by the discussion of cooperative effects. Intramolecular transitions are now discussed in the new edition in much more detail, including also radiationless transitions. Very recent developments in spectroscopy are included, especially two-dimensional and hole-burning spectroscopy. The discussion of charge transfer processes was extended by including recent results of hole transfer in DNA in connection with the super-exchange mechanism. The chapter on molecular motors was rewritten to include the most recent developments of new models. The book is a useful text for students and researchers wanting to go through the mathematical derivations in the theories presented. This book attracts a group of applied mathematically oriented students and scholars to the exciting field of molecular biophysics.??
ISBN,Price9783662556719
Keyword(s)1. Biochemical engineering 2. Biological and Medical Physics, Biophysics 3. BIOLOGICAL PHYSICS 4. BIOMATHEMATICS 5. Biomedical engineering 6. Biomedical Engineering and Bioengineering 7. BIOPHYSICS 8. EBOOK 9. EBOOK - SPRINGER 10. Mathematical and Computational Biology 11. Protein Science 12. Proteins??
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TitleEnvironmental Radiation Effects on Mammals : A Dynamical Modeling Approach
Author(s)Smirnova, Olga A
PublicationCham, Springer International Publishing, 2017.
DescriptionXXIII, 359 p. 203 illus., 4 illus. in color : online resource
Abstract NoteDr. Smirnova's updated text is devoted to the theoretical studies of radiation effects on mammals. It summarizes 35 years of results the author obtained from analyzing dose rate equivalents for the Galactic Cosmic Rays (GCR) and for Solar Particles Events (SPE). This edition also includes two new chapters on skin epidermal epithelium and risk assessment for myeloid leukemia, as well as extended revisions addressing the radiation effects on the blood-forming system. Mathematical models are used to explain the effects of both acute and chronic irradiation on the dynamics of vital body systems, like the hematopoietic system, the development of autoimmune diseases, and the mortality dynamics in homogeneous and nonhomogeneous mammalian populations. The proposed methodology of these studies, the models themselves, and the obtained results are of a great theoretical significance and can find wide practical use.
ISBN,Price9783319457611
Keyword(s)1. Aerospace engineering 2. Aerospace Technology and Astronautics 3. Animal Physiology 4. ASTRONAUTICS 5. Biological and Medical Physics, Biophysics 6. BIOLOGICAL PHYSICS 7. BIOMATHEMATICS 8. BIOPHYSICS 9. EBOOK 10. EBOOK - SPRINGER 11. Imaging / Radiology 12. Mathematical and Computational Biology 13. Occupational medicine 14. Occupational Medicine/Industrial Medicine 15. Radiology
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TitleVasculopathies : Behavioral, Chemical, Environmental, and Genetic Factors
Author(s)Thiriet, Marc
PublicationCham, Springer International Publishing, 2018.
DescriptionXXXIII, 888 p. 6 illus : online resource
Abstract NoteThis volume presents one of the clinical foundations of vasculopathies: the biological markers and risk factors associated with cardiovascular disease. A detailed biological and clinical framework is provided as a prerequisite for adequate modeling. Chapter 1 presents cardiovascular risk factors and markers, where the search for new criteria is aimed at improving early detection of chronic diseases. The subsequent chapters focus on hypertension, which involves the kidney among other organs as well as many agents, hyperglycemia and diabetes, hyperlipidemias and obesity, and behavior. The last of these risk factors includes altered circadian rhythm, tobacco and alcohol consumption, physical inactivity, and diet. The volumes in this series present all of the data needed at various length scales for a multidisciplinary approach to modeling and simulation of flows in the cardiovascular and ventilatory systems, especially multiscale modeling and coupled simulations. The cardiovascular and respiratory systems are tightly coupled, as their primary function is to supply oxygen to and remove carbon dioxide from the body's cells. Because physiological conduits have deformable and reactive walls, macroscopic flow behavior and prediction must be coupled to nano- and microscopic events in a corrector scheme of regulated mechanisms. Therefore, investigation of flows of blood and air in anatomical conduits requires an understanding of the biology, chemistry, and physics of these systems together with the mathematical tools to describe their functioning in quantitative terms
ISBN,Price9783319893150
Keyword(s)1. Biological and Medical Physics, Biophysics 2. BIOLOGICAL PHYSICS 3. BIOMATHEMATICS 4. Biomedical engineering 5. Biomedical Engineering and Bioengineering 6. BIOPHYSICS 7. CARDIOLOGY 8. EBOOK 9. EBOOK - SPRINGER 10. Engineering Fluid Dynamics 11. FLUID MECHANICS 12. Mathematical and Computational Biology 13. Systems biology
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